top of page

Tagged vs Untagged Peptides: Differences Explained

Evidence-Based. Scientifically Reviewed.

The terms "tagged" and "untagged" peptides refer to the presence or absence of an additional sequence or molecular tag attached to a peptide.

Tagged Peptides

A tagged peptide has an additional sequence or molecular tag attached to it. This tag is not part of the original peptide sequence but is added for specific purposes.


Tags are used for various reasons, such as allowing for easier purification, detection, or tracking of the peptide.

For example, a tag might make it easier to isolate the peptide from a complex mixture or to visualise the peptide in an experiment.

Types of Peptide Tags

Common tags include:

  • His-tags (histidine-rich sequences)

  • FLAG-tags (an artificial peptide)

  • GST-tags (glutathione S-transferase)

  • HA-tags (hemagglutinin)

Each one has its own unique properties.


Tagged peptides are often used in protein expression studies, where the tag helps in isolating the protein of interest.

They can also be used in assays that require the identification or quantification of the peptide.

Untagged Peptides

An untagged peptide is basically the peptide without any additional sequences or tags. It represents the native sequence of the peptide.


Untagged peptides are used when the native state of the peptide is critical for the study.

For example, in studying the biological activity of a peptide hormone, an untagged version would be preferred to assess its natural behavior and interactions.


Without a tag, certain experimental procedures, like purification and detection, can be more challenging.

However, this could be necessary if the presence of a tag might interfere with the peptide's function or interactions.

Examples and Types of Tags

Below are some examples of peptides that are commonly available in both tagged and untagged forms.

Research Peptides

  • Growth Factors: Peptides like Fibroblast Growth Factor (FGF), Vascular Endothelial Growth Factor (VEGF), and Insulin-like Growth Factor (IGF) are often used in cell culture and tissue engineering. They can be tagged for ease of purification and detection in experimental setups.

  • Signal Transduction Peptides: Peptides involved in signal transduction pathways, like certain kinase substrates or regulatory peptides, are available in both forms. Tags can help in tracking their interaction and localization within cells.

Recombinant Protein Tags

  • GST (Glutathione S-transferase): This is a common tag used to purify proteins using glutathione affinity chromatography. The GST tag can be cleaved off after purification, yielding an untagged protein.

  • His-Tag (Polyhistidine Tag): Widely used for purifying proteins under mild conditions, His-tagged peptides are commonly used in research. The His-tag can also be removed enzymatically or chemically if needed.

Biomarker Peptides

Peptides that serve as biomarkers for diseases or biological processes may be tagged for detection in assays (like ELISA) but studied in their untagged form to understand their natural role in the body.

Enzyme Substrates and Inhibitors

Peptides that act as substrates or inhibitors of enzymes are often available in both forms.

For instance, substrates for proteases or kinases might be tagged for assay purposes but used in their native form for activity or inhibition studies.

Therapeutic Peptides

Some therapeutic peptides are initially developed with tags to facilitate research and development but are used in their untagged form in clinical settings to mimic their natural counterparts.

Custom Synthetic Peptides

In custom peptide synthesis, researchers can order peptides with specific tags according to their research needs.

These peptides can be designed to include or exclude tags based on the intended application.

Which One?

The choice between a tagged and untagged peptide depends on the objectives of the research or application.

Tagged peptides offer practical advantages for identification and purification, while untagged peptides are essential for studying the natural characteristics and functions of the peptide.

The availability of both tagged and untagged forms allows researchers to choose the most appropriate version for their specific experimental or clinical needs.

The tagged version is often used in the initial stages of research for ease of handling, whereas the untagged version is preferred for studying the peptide's natural behavior and for clinical applications.

In the context of PEDs or clinical use, a tagged peptide might refer to a peptide that has been modified or engineered with an additional sequence or element, not necessarily for scientific research purposes, but possibly to affect its stability, bioavailability, or specific activity in the body.

This could include modifications to prolong the peptide's half-life or to target specific tissues more effectively.

However, there is typically limited or no studies to draw conclusions from.


Give Your Feedback

How would you rate this article?TerribleNot greatSatisfactoryGoodPerfectHow would you rate this article?

Get Your Free Workout Guide

Sign up to receive your free guide to workouts, including 5 of our best tips guaranteed to help you achieve your goals! Sign up now.

Great! Check your inbox.

Our Promise

Real Muscle is a fitness, health, and bodybuilding information publishing company working to make honest, accurate, and evidence-based information easy to find. We are working hard to improve the health and fitness of everyone.

Our evidence-based articles are based on the latest, most trustworthy studies and research, every statement is cited. Read the policy here.

Our evidence-based articles are regularly updated, scientifically reviewed, and fact-checked by subject matter experts. Meet the team here.

All of our articles are put through the most rigorous of editorial standards to ensure the highest-quality article possible. See our process here.

bottom of page